2014-04-07 22:32:31 -03:00
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import unittest
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2014-09-27 11:24:48 +02:00
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import hamming
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2014-06-11 15:06:22 +02:00
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2014-04-07 22:32:31 -03:00
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2019-01-08 20:03:03 +05:30
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# Tests adapted from `problem-specifications//canonical-data.json` @ v2.2.0
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2017-03-20 16:42:22 +01:00
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2014-09-27 11:24:48 +02:00
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class HammingTest(unittest.TestCase):
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2014-04-07 22:32:31 -03:00
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2017-10-26 21:08:57 +05:30
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def test_empty_strands(self):
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self.assertEqual(hamming.distance("", ""), 0)
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2019-01-08 20:03:03 +05:30
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def test_single_letter_identical_strands(self):
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2017-03-23 13:37:20 +01:00
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self.assertEqual(hamming.distance("A", "A"), 0)
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2014-04-07 22:32:31 -03:00
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2019-01-08 20:03:03 +05:30
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def test_single_letter_different_strands(self):
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self.assertEqual(hamming.distance("G", "T"), 1)
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2014-04-07 22:32:31 -03:00
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2019-01-08 20:03:03 +05:30
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def test_long_identical_strands(self):
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self.assertEqual(hamming.distance("GGACTGAAATCTG", "GGACTGAAATCTG"), 0)
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2016-11-24 14:42:42 +01:00
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2019-01-08 20:03:03 +05:30
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def test_long_different_strands(self):
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2017-03-23 13:37:20 +01:00
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self.assertEqual(hamming.distance("GGACGGATTCTG", "AGGACGGATTCT"), 9)
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2016-11-24 14:42:42 +01:00
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def test_disallow_first_strand_longer(self):
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2017-12-12 18:11:43 +00:00
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with self.assertRaisesWithMessage(ValueError):
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2016-11-24 14:42:42 +01:00
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hamming.distance("AATG", "AAA")
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def test_disallow_second_strand_longer(self):
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2017-12-12 18:11:43 +00:00
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with self.assertRaisesWithMessage(ValueError):
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2016-11-24 14:42:42 +01:00
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hamming.distance("ATA", "AGTG")
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2014-04-07 22:32:31 -03:00
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2017-12-12 18:11:43 +00:00
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# Utility functions
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def setUp(self):
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try:
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2018-01-18 10:47:11 -06:00
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self.assertRaisesRegex
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2017-12-12 18:11:43 +00:00
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except AttributeError:
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2018-01-18 10:47:11 -06:00
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self.assertRaisesRegex = self.assertRaisesRegexp
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2017-12-12 18:11:43 +00:00
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def assertRaisesWithMessage(self, exception):
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return self.assertRaisesRegex(exception, r".+")
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2014-04-07 22:32:31 -03:00
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if __name__ == '__main__':
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unittest.main()
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